1. 18 Jul, 2017 1 commit
    • Gregory Ashton's avatar
      Renames sftfilepath -> sftfilepattern · 89f200ed
      Gregory Ashton authored
      This renames the input sftfilepath to sftfilepattern and adds
      documentation on how that should be used, i.e. a colon separated list of
      wildstring or exact matches. In globbing for all matches, the colon
      split is added in. sftfilepath is still used by `Writer` since
      an exact path is known.
      89f200ed
  2. 17 Jul, 2017 1 commit
    • Gregory Ashton's avatar
      Fixes number of sidebands in SSBprec=2 to 9 · 0c858c7f
      Gregory Ashton authored
      - In a prior commit, the number of sidebands checked for the normal search
      (i.e. SSBprec=2) was erroneously set to M0, rather than 9. This fixes
      that.
      - Also improves logging output
      - Splits of the UniformPriorToGrid run function to produce the data and
        plot separately
      0c858c7f
  3. 02 Jun, 2017 1 commit
    • Gregory Ashton's avatar
      Various improvements to the code · 5fe5f787
      Gregory Ashton authored
      - Add peak detection utilities
      - Move generate_loudest
      - Add SSBprec pass through to MCMC searches
      - Fix convergence stat (missing sqrt)
      - Minor fixes to plot_walkers (put detection statistic behind walkers)
      5fe5f787
  4. 31 May, 2017 1 commit
  5. 15 May, 2017 1 commit
    • Gregory Ashton's avatar
      Minor fixes · 5c7e3fa3
      Gregory Ashton authored
      - Adds injectSources to a variety of other methods
      - Adds conversion of injectSource to pfs_input
      5c7e3fa3
  6. 14 May, 2017 1 commit
  7. 12 May, 2017 1 commit
    • Gregory Ashton's avatar
      Improves add_prior functionality · cfc9d8fe
      Gregory Ashton authored
      - Uses the actual prior and not the log-prior as previous
      - Adds option to plot the full extent (currently only for uniform
        priors)
      - ensures the xlims and ylims are reset correctly
      cfc9d8fe
  8. 10 May, 2017 2 commits
  9. 04 May, 2017 1 commit
  10. 03 May, 2017 1 commit
  11. 28 Apr, 2017 1 commit
  12. 24 Apr, 2017 1 commit
    • Gregory Ashton's avatar
      Minor improvements to general running · 1191ecc2
      Gregory Ashton authored
      1) Adds check if the truths are not of the correct length (to prevent
      corner.corner error)
      2) Improve sliding window labels
      3) Adds option to plot gps seconds on the sliding window
      1191ecc2
  13. 20 Apr, 2017 1 commit
    • Gregory Ashton's avatar
      Minor changes to the core file · 99c8266f
      Gregory Ashton authored
      - Expose generate_loudest
      - add check if par exists
      - All read_par to read_loudest
      - Make the default save_fig to be True in plot_corner
      99c8266f
  14. 18 Apr, 2017 1 commit
  15. 12 Apr, 2017 2 commits
  16. 11 Apr, 2017 6 commits
  17. 10 Apr, 2017 2 commits
  18. 05 Apr, 2017 1 commit
  19. 23 Mar, 2017 1 commit
    • Gregory Ashton's avatar
      Various minor changes · ef0b108c
      Gregory Ashton authored
      - Adds latex prior table writer (not found to be useful)
      - Add special case of 0 to texify_float
      - Expose texify_float in core
      - Fix confusing argument order in GridSearch
      ef0b108c
  20. 02 Mar, 2017 1 commit
  21. 28 Feb, 2017 2 commits
  22. 21 Feb, 2017 1 commit
  23. 15 Feb, 2017 2 commits
    • Gregory Ashton's avatar
      Improvements/fixes to the convergence code · 4be56f25
      Gregory Ashton authored
      - Fixes missing sqrt in the convergence test
      - fixes error in periord
      - prevents plotting between burn and prod
      - allow user to specify upper limit
      - refactor code
      4be56f25
    • Gregory Ashton's avatar
      Removes pymc3 · 012cf406
      Gregory Ashton authored
      This was mistakenly added during a testing phase - removed since it is
      not used.
      012cf406
  24. 14 Feb, 2017 2 commits
    • Gregory Ashton's avatar
      Completes adding convergence testing · 505b0ce3
      Gregory Ashton authored
      - restructures the method into several different functions.
      - implements stopping if convergence is met a prespecified number of times
      - adds documentation
      - will plot the convgerence on the RH axis of the walkers plots
      505b0ce3
    • Gregory Ashton's avatar
      Adds convergence checking in a complete form · 35ef58e3
      Gregory Ashton authored
      Convergence testing based on the Rubin-Gelman statistic is implemented
      via `setup_convergence_test`. This does not truncate the search yet, but
      simply adds a trace to the walkers plots for testing
      35ef58e3
  25. 13 Feb, 2017 1 commit
  26. 08 Feb, 2017 1 commit
  27. 03 Feb, 2017 1 commit
  28. 02 Feb, 2017 1 commit
  29. 31 Jan, 2017 1 commit