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Commit 2d711276 authored by Rayne Liu's avatar Rayne Liu
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Most recent pyscript

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......@@ -33,17 +33,17 @@ from scipy.optimize import minimize
#tshift: time shift after the strain peak
#vary_fund: whether you vary the fundamental frequency. Works in the model_dv function.
rootpath= "/Users/RayneLiu"#"/work/rayne.liu"
rootpath="/work/rayne.liu"# "/Users/RayneLiu"
nmax=1
tshift=19
vary_fund = False
#sampler parameters
npoints=1002
npoints=1000000
nwalkers = 42
ntemps=12
ndim = int(4*(nmax+1))
burnin = 200 #How many points do you burn before doing the corner plot. You need to watch the convergence of the chain plot a bit.
burnin = 420000 #How many points do you burn before doing the corner plot. You need to watch the convergence of the chain plot a bit.
#This is trivial but often forgotten: this cannot be more than npoints! Usually 1/5~1/4 npoints is what I observe.
numbins = 42 #corner plot parameter - how many bins you want
datacolor = '#105670' #'#4fa3a7'
......@@ -172,8 +172,8 @@ def log_probability(theta):
#Fit with ptemcee
#Set the number of cores of your processors
pool = choose_pool(6)
pool.size = 6
pool = choose_pool(12)
pool.size = 12
vary_param = float(vary_fund)
pos = np.array([[random.uniform(-0.1,0.1), random.uniform(-0.1,0.1), 4.28313743e-01, random.uniform(2.5, 2.6) + (1-vary_param) * np.pi]])
for i in range (1,nmax+1):
......
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