Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
S
Summer-MachineLearning
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
Yifan Wang
Summer-MachineLearning
Commits
78564707
Commit
78564707
authored
3 years ago
by
Simran Dave
Browse files
Options
Downloads
Patches
Plain Diff
Upload New File
parent
a4651ce2
No related branches found
No related tags found
No related merge requests found
Changes
1
Show whitespace changes
Inline
Side-by-side
Showing
1 changed file
training_script.ipynb
+269
-0
269 additions, 0 deletions
training_script.ipynb
with
269 additions
and
0 deletions
training_script.ipynb
0 → 100644
+
269
−
0
View file @
78564707
{
"cells": [
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[11.71494203]\n",
"[24.12391095]\n",
"[10.38877496]\n",
"[7.09610681]\n"
]
}
],
"source": [
"import pylab\n",
"import pycbc\n",
"from pycbc.waveform import get_td_waveform\n",
"from pycbc.waveform import get_fd_waveform\n",
"from pycbc.waveform import fd_approximants\n",
"import pycbc.noise\n",
"import pycbc.psd\n",
"from pycbc.types import TimeSeries\n",
"from pycbc import distributions\n",
"import numpy as np\n",
"for i in range(10):\n",
" mass1_distribution = distributions.uniform_log.UniformLog10(mass1=(5, 95))\n",
" mass1_value=mass1_distribution.rvs(size=1)\n",
" mass2_distribution = distributions.uniform_log.UniformLog10(mass2=(5, 95))\n",
" mass2_value=mass2_distribution.rvs(size=1)\n",
" print(mass1_value['mass1'])\n",
" print(mass2_value['mass2'])\n",
" hp, hc = get_td_waveform(approximant='SEOBNRv4',\n",
" mass1=mass1_value['mass1'],\n",
" mass2=mass2_value['mass2'],\n",
" delta_t=1.0/4096,\n",
" f_lower=40)\n",
" for j in range(10):\n",
" seed_value=np.random.randint(1, 200)\n",
" flow = 30.0\n",
" delta_f = 1.0 / 16\n",
" flen = int(2048 / delta_f) + 1\n",
" psd = pycbc.psd.aLIGOZeroDetHighPower(flen, delta_f, flow)\n",
" delta_t = 1.0 / 4096\n",
" tsamples = int(5 / delta_t)\n",
" ts = pycbc.noise.noise_from_psd(tsamples, delta_t, psd, seed=seed_value)\n",
" tlen = 5 / delta_t\n",
" hp.resize(tlen)\n",
" ts.resize(tlen)\n",
" hp_new = TimeSeries(hp.data.data, dtype=hp.dtype,delta_t=delta_t, epoch=0)\n",
" final = hp_new + ts\n",
" \n",
" np.savetxt(str(i) + str(j) + '.txt',np.transpose([final.sample_times,final])) \n",
" "
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Requirement already satisfied: pycbc in /opt/anaconda3/lib/python3.8/site-packages (1.18.1)\n",
"Requirement already satisfied: ligo-common in /opt/anaconda3/lib/python3.8/site-packages (1.0.3)\n",
"Requirement already satisfied: jinja2 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.11.2)\n",
"Requirement already satisfied: lalsuite in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (6.82)\n",
"Requirement already satisfied: scipy>=0.16.0; python_version >= \"3.5\" in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.5.0)\n",
"Requirement already satisfied: mpld3>=0.3 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (0.5.5)\n",
"Requirement already satisfied: decorator>=3.4.2 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.4.2)\n",
"Requirement already satisfied: gwdatafind in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.0.4)\n",
"Requirement already satisfied: matplotlib>=1.5.1 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (3.2.2)\n",
"Requirement already satisfied: numpy>=1.16.0 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.18.5)\n",
"Requirement already satisfied: requests>=1.2.1 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.24.0)\n",
"Requirement already satisfied: lscsoft-glue>=1.59.3 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.0.0)\n",
"Requirement already satisfied: ligo-segments in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.3.0)\n",
"Requirement already satisfied: six>=1.10.0 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.15.0)\n",
"Requirement already satisfied: tqdm in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.47.0)\n",
"Requirement already satisfied: cython>=0.29 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (0.29.21)\n",
"Requirement already satisfied: beautifulsoup4>=4.6.0 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.9.1)\n",
"Requirement already satisfied: astropy!=4.0.5,!=4.2.1,>=2.0.3; python_version > \"3.0\" in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.0.1.post1)\n",
"Requirement already satisfied: Mako>=1.0.1 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.1.4)\n",
"Requirement already satisfied: h5py>=2.5; python_version > \"3.6\" in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.10.0)\n",
"Requirement already satisfied: pillow in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (7.2.0)\n",
"Requirement already satisfied: MarkupSafe>=0.23 in /opt/anaconda3/lib/python3.8/site-packages (from jinja2->pycbc) (1.1.1)\n",
"Requirement already satisfied: python-dateutil in /opt/anaconda3/lib/python3.8/site-packages (from lalsuite->pycbc) (2.8.1)\n",
"Requirement already satisfied: pyOpenSSL in /opt/anaconda3/lib/python3.8/site-packages (from gwdatafind->pycbc) (19.1.0)\n",
"Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /opt/anaconda3/lib/python3.8/site-packages (from matplotlib>=1.5.1->pycbc) (2.4.7)\n",
"Requirement already satisfied: cycler>=0.10 in /opt/anaconda3/lib/python3.8/site-packages (from matplotlib>=1.5.1->pycbc) (0.10.0)\n",
"Requirement already satisfied: kiwisolver>=1.0.1 in /opt/anaconda3/lib/python3.8/site-packages (from matplotlib>=1.5.1->pycbc) (1.2.0)\n",
"Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (1.25.9)\n",
"Requirement already satisfied: certifi>=2017.4.17 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (2020.6.20)\n",
"Requirement already satisfied: idna<3,>=2.5 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (2.10)\n",
"Requirement already satisfied: chardet<4,>=3.0.2 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (3.0.4)\n",
"Requirement already satisfied: soupsieve>1.2 in /opt/anaconda3/lib/python3.8/site-packages (from beautifulsoup4>=4.6.0->pycbc) (2.0.1)\n",
"Requirement already satisfied: cryptography>=2.8 in /opt/anaconda3/lib/python3.8/site-packages (from pyOpenSSL->gwdatafind->pycbc) (2.9.2)\n",
"Requirement already satisfied: cffi!=1.11.3,>=1.8 in /opt/anaconda3/lib/python3.8/site-packages (from cryptography>=2.8->pyOpenSSL->gwdatafind->pycbc) (1.14.0)\n",
"Requirement already satisfied: pycparser in /opt/anaconda3/lib/python3.8/site-packages (from cffi!=1.11.3,>=1.8->cryptography>=2.8->pyOpenSSL->gwdatafind->pycbc) (2.20)\n"
]
}
],
"source": [
"import sys\n",
"!{sys.executable} -m pip install pycbc ligo-common --no-cache-dir"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"/Users/simrandave\n"
]
}
],
"source": [
"cd"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"/Users/simrandave/OneDrive\n"
]
}
],
"source": [
"cd OneDrive"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[Errno 2] No such file or directory: 'aei_research'\n",
"/Users/simrandave/OneDrive\n"
]
}
],
"source": []
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"/Users/simrandave/OneDrive/Documents\n"
]
}
],
"source": [
"cd Documents"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"/Users/simrandave/OneDrive/Documents/aei_research\n"
]
}
],
"source": [
"cd aei_research"
]
},
{
"cell_type": "code",
"execution_count": 57,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[9.76986447]\n"
]
}
],
"source": [
"from pycbc import distributions\n",
"mass1_distribution = distributions.uniform_log.UniformLog10(mass1=(5, 95))\n",
"mass1_value=mass1_distribution.rvs(size=1)\n",
"print(mass1_value['mass1'])"
]
},
{
"cell_type": "code",
"execution_count": 61,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[73.69821286]\n",
"[5.24642144]\n"
]
}
],
"source": [
"mass1_distribution = distributions.uniform_log.UniformLog10(mass1=(5, 95))\n",
"mass1_value=mass1_distribution.rvs(size=1)\n",
"mass2_distribution = distributions.uniform_log.UniformLog10(mass2=(5, 95))\n",
"mass2_value=mass2_distribution.rvs(size=1)\n",
"print(mass1_value['mass1'])\n",
"print(mass2_value['mass2'])"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.3"
}
},
"nbformat": 4,
"nbformat_minor": 4
}
%% Cell type:code id: tags:
```
python
import
pylab
import
pycbc
from
pycbc.waveform
import
get_td_waveform
from
pycbc.waveform
import
get_fd_waveform
from
pycbc.waveform
import
fd_approximants
import
pycbc.noise
import
pycbc.psd
from
pycbc.types
import
TimeSeries
from
pycbc
import
distributions
import
numpy
as
np
for
i
in
range
(
10
):
mass1_distribution
=
distributions
.
uniform_log
.
UniformLog10
(
mass1
=
(
5
,
95
))
mass1_value
=
mass1_distribution
.
rvs
(
size
=
1
)
mass2_distribution
=
distributions
.
uniform_log
.
UniformLog10
(
mass2
=
(
5
,
95
))
mass2_value
=
mass2_distribution
.
rvs
(
size
=
1
)
print
(
mass1_value
[
'
mass1
'
])
print
(
mass2_value
[
'
mass2
'
])
hp
,
hc
=
get_td_waveform
(
approximant
=
'
SEOBNRv4
'
,
mass1
=
mass1_value
[
'
mass1
'
],
mass2
=
mass2_value
[
'
mass2
'
],
delta_t
=
1.0
/
4096
,
f_lower
=
40
)
for
j
in
range
(
10
):
seed_value
=
np
.
random
.
randint
(
1
,
200
)
flow
=
30.0
delta_f
=
1.0
/
16
flen
=
int
(
2048
/
delta_f
)
+
1
psd
=
pycbc
.
psd
.
aLIGOZeroDetHighPower
(
flen
,
delta_f
,
flow
)
delta_t
=
1.0
/
4096
tsamples
=
int
(
5
/
delta_t
)
ts
=
pycbc
.
noise
.
noise_from_psd
(
tsamples
,
delta_t
,
psd
,
seed
=
seed_value
)
tlen
=
5
/
delta_t
hp
.
resize
(
tlen
)
ts
.
resize
(
tlen
)
hp_new
=
TimeSeries
(
hp
.
data
.
data
,
dtype
=
hp
.
dtype
,
delta_t
=
delta_t
,
epoch
=
0
)
final
=
hp_new
+
ts
np
.
savetxt
(
str
(
i
)
+
str
(
j
)
+
'
.txt
'
,
np
.
transpose
([
final
.
sample_times
,
final
]))
```
%% Output
[11.71494203]
[24.12391095]
[10.38877496]
[7.09610681]
%% Cell type:code id: tags:
```
python
import
sys
!
{
sys
.
executable
}
-
m
pip
install
pycbc
ligo
-
common
--
no
-
cache
-
dir
```
%% Output
Requirement already satisfied: pycbc in /opt/anaconda3/lib/python3.8/site-packages (1.18.1)
Requirement already satisfied: ligo-common in /opt/anaconda3/lib/python3.8/site-packages (1.0.3)
Requirement already satisfied: jinja2 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.11.2)
Requirement already satisfied: lalsuite in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (6.82)
Requirement already satisfied: scipy>=0.16.0; python_version >= "3.5" in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.5.0)
Requirement already satisfied: mpld3>=0.3 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (0.5.5)
Requirement already satisfied: decorator>=3.4.2 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.4.2)
Requirement already satisfied: gwdatafind in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.0.4)
Requirement already satisfied: matplotlib>=1.5.1 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (3.2.2)
Requirement already satisfied: numpy>=1.16.0 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.18.5)
Requirement already satisfied: requests>=1.2.1 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.24.0)
Requirement already satisfied: lscsoft-glue>=1.59.3 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.0.0)
Requirement already satisfied: ligo-segments in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.3.0)
Requirement already satisfied: six>=1.10.0 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.15.0)
Requirement already satisfied: tqdm in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.47.0)
Requirement already satisfied: cython>=0.29 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (0.29.21)
Requirement already satisfied: beautifulsoup4>=4.6.0 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.9.1)
Requirement already satisfied: astropy!=4.0.5,!=4.2.1,>=2.0.3; python_version > "3.0" in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (4.0.1.post1)
Requirement already satisfied: Mako>=1.0.1 in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (1.1.4)
Requirement already satisfied: h5py>=2.5; python_version > "3.6" in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (2.10.0)
Requirement already satisfied: pillow in /opt/anaconda3/lib/python3.8/site-packages (from pycbc) (7.2.0)
Requirement already satisfied: MarkupSafe>=0.23 in /opt/anaconda3/lib/python3.8/site-packages (from jinja2->pycbc) (1.1.1)
Requirement already satisfied: python-dateutil in /opt/anaconda3/lib/python3.8/site-packages (from lalsuite->pycbc) (2.8.1)
Requirement already satisfied: pyOpenSSL in /opt/anaconda3/lib/python3.8/site-packages (from gwdatafind->pycbc) (19.1.0)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /opt/anaconda3/lib/python3.8/site-packages (from matplotlib>=1.5.1->pycbc) (2.4.7)
Requirement already satisfied: cycler>=0.10 in /opt/anaconda3/lib/python3.8/site-packages (from matplotlib>=1.5.1->pycbc) (0.10.0)
Requirement already satisfied: kiwisolver>=1.0.1 in /opt/anaconda3/lib/python3.8/site-packages (from matplotlib>=1.5.1->pycbc) (1.2.0)
Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (1.25.9)
Requirement already satisfied: certifi>=2017.4.17 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (2020.6.20)
Requirement already satisfied: idna<3,>=2.5 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (2.10)
Requirement already satisfied: chardet<4,>=3.0.2 in /opt/anaconda3/lib/python3.8/site-packages (from requests>=1.2.1->pycbc) (3.0.4)
Requirement already satisfied: soupsieve>1.2 in /opt/anaconda3/lib/python3.8/site-packages (from beautifulsoup4>=4.6.0->pycbc) (2.0.1)
Requirement already satisfied: cryptography>=2.8 in /opt/anaconda3/lib/python3.8/site-packages (from pyOpenSSL->gwdatafind->pycbc) (2.9.2)
Requirement already satisfied: cffi!=1.11.3,>=1.8 in /opt/anaconda3/lib/python3.8/site-packages (from cryptography>=2.8->pyOpenSSL->gwdatafind->pycbc) (1.14.0)
Requirement already satisfied: pycparser in /opt/anaconda3/lib/python3.8/site-packages (from cffi!=1.11.3,>=1.8->cryptography>=2.8->pyOpenSSL->gwdatafind->pycbc) (2.20)
%% Cell type:code id: tags:
```
python
cd
```
%% Output
/Users/simrandave
%% Cell type:code id: tags:
```
python
cd
OneDrive
```
%% Output
/Users/simrandave/OneDrive
%% Cell type:code id: tags:
```
python
``
`
%%
Output
[
Errno
2
]
No
such
file
or
directory
:
'
aei_research
'
/
Users
/
simrandave
/
OneDrive
%%
Cell
type
:
code
id
:
tags
:
```
python
cd Documents
```
%% Output
/Users/simrandave/OneDrive/Documents
%% Cell type:code id: tags:
```
python
cd aei_research
```
%% Output
/Users/simrandave/OneDrive/Documents/aei_research
%% Cell type:code id: tags:
```
python
from pycbc import distributions
mass1_distribution = distributions.uniform_log.UniformLog10(mass1=(5, 95))
mass1_value=mass1_distribution.rvs(size=1)
print(mass1_value['mass1'])
```
%% Output
[9.76986447]
%% Cell type:code id: tags:
```
python
mass1_distribution = distributions.uniform_log.UniformLog10(mass1=(5, 95))
mass1_value=mass1_distribution.rvs(size=1)
mass2_distribution = distributions.uniform_log.UniformLog10(mass2=(5, 95))
mass2_value=mass2_distribution.rvs(size=1)
print(mass1_value['mass1'])
print(mass2_value['mass2'])
```
%% Output
[73.69821286]
[5.24642144]
%% Cell type:code id: tags:
```
python
```
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment
