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Commit 31cd7578 authored by Grant David Meadors's avatar Grant David Meadors
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Fixed remaining issues with the interstitial frame DAG concept

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...@@ -46,18 +46,18 @@ Compiling main feedforward program: ...@@ -46,18 +46,18 @@ Compiling main feedforward program:
but it runs with a sourced bashrc on pulsar. but it runs with a sourced bashrc on pulsar.
Submitting main feedforward Condor jobs: Submitting main feedforward Condor jobs:
0. Submit to the CIT cluster nodes with "condor_submit_dag EleutheriaDAG.dag" 0. Submit to the CIT cluster nodes with "condor_submit_dag -maxjobs 100 EleutheriaDAG.dag"
1. Watch progress and verify done with "condor_q pulsar" checks and 1. Watch progress and verify done with "condor_q pulsar" checks and
reading the output logs. reading the output logs.
Filling in interstitial frames: Filling in interstitial frames:
0. Create the frames in between science segments after the main feedforward 0. Create the frames in between science segments after the main feedforward
jobs are completed. jobs are completed.
1. Text edit "createInterstitialCondorSubmitFile.py" 1. Text edit "createInterstitialCondorDagFile.py"
to ensure that analysisDate has the current "yyyy/mm/dd". to ensure that analysisDate has the current "yyyy/mm/dd".
2. Run "./createInterstitialCondorSubmitFile.py" 2. Run "./createInterstitialCondorDagFile.py"
3. Compile "mcc -mv interstitialFrame.m" 3. Compile "/ldcg/matlab_r2012a/bin/mcc -mv -R -nodisplay -R -nojvm -R -singleCompThread interstitialFrame.m"
4. Submit "condor_submit InterstitialSub.sub" 4. Submit "condor_submit_dag -maxjobs 100 InterstitialDAG.dag"
Post-processing basic plots: Post-processing basic plots:
0. Produce basic plots of range and verify log file output by starting 0. Produce basic plots of range and verify log file output by starting
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...@@ -54,6 +54,7 @@ h("output = /home/pulsar/feedforward/" + analysisDate + "/AMPS/interstitialLogs/ ...@@ -54,6 +54,7 @@ h("output = /home/pulsar/feedforward/" + analysisDate + "/AMPS/interstitialLogs/
h("error = interstitialLogs/interstitial.err.$(tagstring)") h("error = interstitialLogs/interstitial.err.$(tagstring)")
h("log = interstitialLogs/interstitial.log.$(tagstring)") h("log = interstitialLogs/interstitial.log.$(tagstring)")
h("request_memory = 4 GB") h("request_memory = 4 GB")
h("environment = HOME=/archive/home/pulsar;LD_LIBRARY_PATH=/ldcg/matlab_r2012a/runtime/glnxa64:/ldcg/matlab_r2012a/bin/glnxa64:/ldcg/matlab_r2012a/extern/lib/glnxa64:/ligotools/lib")
h("notification = never") h("notification = never")
h("") h("")
h("arguments = $(argList)") h("arguments = $(argList)")
......
...@@ -23,7 +23,7 @@ echo "------------------------------------------" ...@@ -23,7 +23,7 @@ echo "------------------------------------------"
# LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; # LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ;
# LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; # LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ;
# XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; # XAPPLRESDIR=${MCRROOT}/X11/app-defaults ;
LD_LIBRARY_PATH=/ldcg/matlab_r2010b/runtime/glnxa64:/ldcg/matlab_r2010b/bin/glnxa64:/ldcg/matlab_r2010b/extern/lib/glnxa64:/ligotools/lib ; LD_LIBRARY_PATH=/ldcg/matlab_r2012a/runtime/glnxa64:/ldcg/matlab_r2012a/bin/glnxa64:/ldcg/matlab_r2012a/extern/lib/glnxa64:/ligotools/lib ;
export LD_LIBRARY_PATH; export LD_LIBRARY_PATH;
export XAPPLRESDIR; export XAPPLRESDIR;
echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH};
......
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